PubMed MCP
A MCP server for PubMed data
grll
README
PubMed MCP
A MCP server that allows to search and fetch articles from PubMed.
PubMed is a database of over 35 million citations for biomedical literature from MEDLINE, life science journals, and online books.
This MCP server relies on the pubmedclient Python package to perform the search and fetch operations.
Usage
Add the following to your claude_desktop_config.json file:
{
"mcpServers": {
"pubmedmcp": {
"command": "uvx",
"args": ["pubmedmcp@latest"],
"env": {
"UV_PRERELEASE": "allow",
"UV_PYTHON": "3.12"
}
}
}
}
Make sure uv is installed on your system and 'uvx' is available in your PATH (claude PATH sometimes is not the same as your system PATH).
You can add a PATH key in your claude_desktop_config.json file to make sure uv is available in claude PATH.
Recommended Servers
Crypto Price & Market Analysis MCP Server
A Model Context Protocol (MCP) server that provides comprehensive cryptocurrency analysis using the CoinCap API. This server offers real-time price data, market analysis, and historical trends through an easy-to-use interface.
MCP PubMed Search
Server to search PubMed (PubMed is a free, online database that allows users to search for biomedical and life sciences literature). I have created on a day MCP came out but was on vacation, I saw someone post similar server in your DB, but figured to post mine.
dbt Semantic Layer MCP Server
A server that enables querying the dbt Semantic Layer through natural language conversations with Claude Desktop and other AI assistants, allowing users to discover metrics, create queries, analyze data, and visualize results.
mixpanel
Connect to your Mixpanel data. Query events, retention, and funnel data from Mixpanel analytics.
Sequential Thinking MCP Server
This server facilitates structured problem-solving by breaking down complex issues into sequential steps, supporting revisions, and enabling multiple solution paths through full MCP integration.
Nefino MCP Server
Provides large language models with access to news and information about renewable energy projects in Germany, allowing filtering by location, topic (solar, wind, hydrogen), and date range.
Vectorize
Vectorize MCP server for advanced retrieval, Private Deep Research, Anything-to-Markdown file extraction and text chunking.
Mathematica Documentation MCP server
A server that provides access to Mathematica documentation through FastMCP, enabling users to retrieve function documentation and list package symbols from Wolfram Mathematica.
kb-mcp-server
An MCP server aimed to be portable, local, easy and convenient to support semantic/graph based retrieval of txtai "all in one" embeddings database. Any txtai embeddings db in tar.gz form can be loaded
Research MCP Server
The server functions as an MCP server to interact with Notion for retrieving and creating survey data, integrating with the Claude Desktop Client for conducting and reviewing surveys.