obsidian-rag
Provides semantic search over Obsidian markdown notes using BAAI/bge-m3 embeddings and ChromaDB, accessible via the Model Context Protocol.
README
Obsidian RAG — Semantic Note Search
Local semantic search for your Obsidian vault, powered by BAAI/bge-m3 embeddings and ChromaDB.
Features
- Semantic search — find notes by meaning, not just keywords
- Markdown-aware chunking — splits by heading hierarchy for better context
- Apple Silicon acceleration — MPS support for M-series Macs
- Multiple interfaces — CLI, REST API, and MCP server (for Claude/Cursor)
- Multilingual — full Chinese-English support via bge-m3
Quick Start
# Install
pip install -e .
# Index your vault
export OBSIDIAN_VAULT_PATH="/path/to/your/vault"
python -m obsidian_rag index "$OBSIDIAN_VAULT_PATH" --full
# Search
python -m obsidian_rag search "your question"
# Start API server (for web UI or integrations)
python -m obsidian_rag api
Architecture
Obsidian vault (.md files)
→ chunker.py: split by Markdown headings
→ embeddings.py: BAAI/bge-m3 (MPS accelerated)
→ ChromaDB: cosine similarity vector store
→ Interfaces:
├── CLI: python -m obsidian_rag search "query"
├── REST API: FastAPI on :8787
└── MCP: Claude Code / Cursor integration
Tech Stack
| Component | Choice |
|---|---|
| Embedding model | BAAI/bge-m3 (1024d, multilingual) |
| Vector DB | ChromaDB (local, cosine space) |
| API | FastAPI + Uvicorn |
| AI integration | MCP (Model Context Protocol) |
MCP Configuration
For Claude Code (.mcp.json):
{
"mcpServers": {
"obsidian-rag": {
"command": "python",
"args": ["-m", "obsidian_rag.server"],
"env": {
"OBSIDIAN_VAULT_PATH": "/path/to/your/vault"
}
}
}
}
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