Memory Engine MCP Server

Deprecated: Use ProjectContext.

A high-performance MCP (Model Context Protocol) server providing long-term memory storage with semantic and keyword search capabilities.

Features

• Fast Semantic Search: Uses fastembed with BAAI/bge-small-en-v1.5 for fast startup and low memory usage
• Hybrid Search: Combines keyword (FTS5) and vector search using Reciprocal Rank Fusion (RRF)
• Persistent Storage: SQLite-based storage with sqlite-vec extension
• Sub-200ms Queries: Keep embedding model in memory for fast response times
• MCP Native: Exposes save_memory and query_memory as native MCP tools

Installation

# Clone the repository
git clone <repo-url>
cd agentmemory

# Install dependencies with uv
uv sync

# Or install globally
uv pip install -e .

Usage

Running the Server

# Run directly
agentmemory

# Or with uv
uv run agentmemory

MCP Configuration

Add to your MCP client configuration (e.g., mcp.json):

{
  "mcpServers": {
    "memory": {
      "command": "uv",
      "args": ["run", "agentmemory"],
      "cwd": "/path/to/agentmemory"
    }
  }
}

Or using the installed script:

{
  "mcpServers": {
    "memory": {
      "command": "agentmemory"
    }
  }
}

MCP Tools

save_memory

Save a memory to long-term storage.

Arguments:

• category (string): Category of the memory (e.g., "architecture", "preference", "bug_fix")
• topic (string): Short descriptive title
• content (string): Detailed memory/decision text

Returns:

{
  "status": "success",
  "doc_id": 123,
  "topic": "Example Topic",
  "category": "architecture"
}

query_memory

Query memories using semantic and keyword search.

Arguments:

• query (string): Natural language search string
• top_k (integer, optional): Number of results to return (default: 3)

Returns:

[
  {
    "id": 123,
    "category": "architecture",
    "topic": "Example Topic",
    "content": "Detailed content...",
    "timestamp": "2024-02-04 13:22:00",
    "last_verified": "2024-02-04 13:22:00",
    "score": 0.8542
  }
]

Note: last_verified indicates when the memory was last confirmed as accurate. Use verify_memory to update this timestamp.

delete_memory

Delete a memory by ID.

Arguments:

• doc_id (integer): The ID of the memory to delete

Returns:

{
  "status": "success",
  "message": "Memory 123 deleted"
}

update_memory

Update a memory by ID.

Arguments:

• doc_id (integer): The ID of the memory to update
• category (string, optional): New category
• topic (string, optional): New topic
• content (string, optional): New content

Returns:

{
  "status": "success",
  "doc_id": 123,
  "topic": "Updated Topic",
  "category": "updated_category",
  "message": "Memory updated"
}

verify_memory

Mark a memory as verified by updating its last_verified timestamp to now.

Use this when:

• You've confirmed a memory is still accurate
• You've checked information against current code
• You want to prevent hallucinations from stale data

Arguments:

• doc_id (integer): The ID of the memory to verify

Returns:

{
  "status": "success",
  "doc_id": 123,
  "message": "Memory verified and timestamp updated"
}

Note: This helps track memory freshness. Memories with old last_verified timestamps should be treated with caution.

MCP Resources

memory://usage-guidelines

Provides comprehensive usage guidelines for AI agents using the memory system.

Access via MCP client:

content = await client.read_resource("memory://usage-guidelines")
print(content[0].text)

Contains:

• When to save memories (DO's and DON'Ts)
• How to structure memories (category, topic, content)
• How to query effectively
• Best practices and common patterns
• Search features and capabilities
• Privacy and security considerations

Note: AI agents can read this resource to understand how to use the memory system effectively. The guidelines help ensure memories are saved consistently and can be retrieved efficiently.

Examples

Saving a Technical Decision

Agent: "I'll record that we've decided to use SQLite for its simplicity and local persistence."

save_memory(
    category="architecture",
    topic="Database Choice",
    content="We chose SQLite with sqlite-vec for local vector storage. This avoids external dependencies and keeps data within the project git root."
)

Retrieving Project Context

Agent: "Let me check our previous decisions about the tech stack."

query_memory(query="tech stack decisions")
# Returns: [Database Choice, Python version requirements, etc.]

Preventing Stale Data

Agent: "I just verified that the Python version requirement is still 3.12."

verify_memory(doc_id=123)

Architecture

Technology Stack

• Framework: FastMCP (Python MCP library)
• Embeddings: fastembed (BAAI/bge-small-en-v1.5, 384-dim)
• Database: SQLite with sqlite-vec and FTS5 extensions
• Communication: JSON-RPC over stdio

Data Flow

1. Save: Content → Embedding → SQLite (docs + docs_fts + docs_vec)
2. Query: Query → Embedding → Parallel FTS5 + Vector Search → RRF Fusion → Ranked Results

Database Schema

-- Main documents table
CREATE TABLE docs (
  id INTEGER PRIMARY KEY,
  category TEXT,
  topic TEXT,
  content TEXT,
  timestamp DATETIME DEFAULT CURRENT_TIMESTAMP,
  last_verified DATETIME DEFAULT CURRENT_TIMESTAMP
);

-- Full-text search index
CREATE VIRTUAL TABLE docs_fts USING fts5(
  category, topic, content,
  content='docs',
  content_rowid='id'
);

-- Vector search index
CREATE VIRTUAL TABLE docs_vec USING vec0(
  id INTEGER PRIMARY KEY,
  embedding float[384]
);

Storage Location

The database is stored in .ctxhub/memory.sqlite in the git root directory (or current working directory if not in a git repo). This allows the memory to travel with the project while remaining hidden from version control.

Performance

• First Query: ~500ms (model initialization + query)
• Subsequent Queries: <200ms (model kept in memory)
• Embedding Model Size: ~133MB (BAAI/bge-small-en-v1.5)
• Memory Usage: ~200MB base + model

Development

Project Structure

agentmemory/
├── src/
│   └── agentmemory/
│       ├── __init__.py
│       └── server.py       # MCP server implementation
├── pyproject.toml          # Project configuration
└── .agent-memory/
    └── db.sqlite           # Persistent database (in git root)

Testing

The project includes a comprehensive test suite.

# Quick start: runs main tests and offers to start server
./quickstart.sh

# Run specific tests manually
uv run python tests/test_server.py
uv run python tests/test_freshness.py
uv run python tests/test_updates.py

MCP Inspector

You can also test the tools interactively using the MCP Inspector:

npx @modelcontextprotocol/inspector uv run agentmemory

License

GPLv3