mcp-server-redcap

mcp-server-redcap

Enables interaction with REDCap instances for managing research data, projects, and files through natural language.

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README

mcp-server-redcap

A Model Context Protocol (MCP) server for interacting with REDCap (Research Electronic Data Capture) instances.

Exposes 38 tools covering data access, project design, file management, and longitudinal project structure. Designed for use with LLM agents that need to query or build REDCap projects in natural language conversations.

Tools

Records

Tool Description
export_records Export records with optional filters by field, record ID, or event
import_records Import records from a JSON payload
delete_records Delete records by ID
export_report Export a saved REDCap report by its ID
export_field_names Export the mapping from field names to export names (required for checkbox fields)
generate_next_record_name Get the next available record ID respecting the project's auto-numbering

Metadata

Tool Description
get_project_info Retrieve project-level information and settings
get_metadata Export the data dictionary, optionally filtered by field or form
export_logging Export the project audit log, with filters by type, user, record, or date range
export_repeating_instruments_events Export the repeating instruments/events configuration
import_repeating_instruments_events Update the repeating instruments/events configuration

Instruments & project design

Tool Description
get_instruments List all instruments with internal names and display labels
get_instrument_event_mappings List arm/event/instrument mappings (longitudinal projects)
add_field Add a new field to an instrument (round-trip through data dictionary)
remove_field Remove a field from the data dictionary
update_field Update specific properties of a field without touching the rest
add_instrument Create a new instrument
delete_instrument Delete an instrument and all its fields
rename_instrument Rename an instrument's internal name
move_field Reposition a field within the data dictionary
clone_instrument Copy all fields of an instrument into a new one with a field-name prefix
assign_instrument_to_event Add an instrument to a longitudinal event
unassign_instrument_from_event Remove an instrument from a longitudinal event

Analysis

Tool Description
get_project_structure Compact overview of the whole project: instruments, field counts, event matrix
check_field_references Find all fields that reference a given field in branching logic or calculations
validate_branching_logic Scan all branching logic for references to non-existent fields

Files

Tool Description
export_file Download a file attachment from a record field (returned as base64)
import_file Upload a file to a record field (accepts base64 content)
delete_file Delete a file attachment from a record field
export_pdf Export a PDF of one or more instruments for a record (returned as base64)

Arms & events (longitudinal)

Tool Description
export_arms List arms
import_arms Create or update arms
delete_arms Delete arms by number
export_events List events, optionally filtered by arm
import_events Create or update events
delete_events Delete events by unique name

Surveys

Tool Description
export_survey_link Get a participant-specific survey URL for a record
export_survey_participant_list List survey participants and their response status

Installation

pip install mcp-server-redcap

Or with uv:

uvx mcp-server-redcap

REDCap version compatibility

The server works against any REDCap instance running version 8.0 or later. Most tools are available from version 6.x, but export_pdf requires 8.x. Repeating instruments (export_repeating_instruments_events, import_repeating_instruments_events) require 6.16+. Tools that are unavailable on a given instance return a plain error string rather than crashing.

The current REDCap version of the connected instance is included in the output of get_project_structure.

Configuration

The server reads connection details from environment variables:

Variable Required Description
REDCAP_URL Yes Full REDCap API endpoint URL (e.g. https://redcap.example.org/api/)
REDCAP_TOKEN Yes Project-level API token from REDCap → API → Generate Token
REDCAP_VERIFY_SSL No Set to false to skip SSL verification (default: true)

Create a .env file in your working directory and the server will load it automatically:

REDCAP_URL=https://redcap.example.org/api/
REDCAP_TOKEN=your_project_token_here

Usage with Claude Code

Add the server to your Claude Code MCP configuration:

claude mcp add redcap -e REDCAP_URL=https://redcap.example.org/api/ \
                      -e REDCAP_TOKEN=your_token -- uvx mcp-server-redcap

Or edit .claude/settings.json manually:

{
  "mcpServers": {
    "redcap": {
      "command": "uvx",
      "args": ["mcp-server-redcap"],
      "env": {
        "REDCAP_URL": "https://redcap.example.org/api/",
        "REDCAP_TOKEN": "your_project_token_here"
      }
    }
  }
}

Development

git clone https://github.com/msicilia/mcp-server-redcap
cd mcp-server-redcap
uv sync --extra dev

Run the MCP inspector for interactive local testing:

uv run mcp dev src/mcp_server_redcap/server.py

Run the server directly (stdio transport, for use with MCP clients):

uv run mcp-server-redcap

Project structure

src/mcp_server_redcap/
├── __init__.py
├── __main__.py          # python -m mcp_server_redcap
├── server.py            # FastMCP server factory and entry point
├── connection.py        # REDCap project connection (lazy, singleton)
└── tools/
    ├── __init__.py
    ├── records.py       # record CRUD, field names, next record name
    ├── metadata.py      # project info, data dictionary, logging, repeating instruments
    ├── instruments.py   # instrument listing, field and instrument mutations
    ├── analysis.py      # project structure overview, reference and logic validation
    ├── files.py         # file attachments and PDF export
    ├── arms_events.py   # longitudinal arms and events CRUD
    └── surveys.py       # survey links and participant lists

See DESIGN.md for the full API reference and design rationale.

License

MIT

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