Clinical Intelligence MCP Server
Enables searching clinical trials, PubMed, Open Targets, and openFDA data, with optional Vertex AI grounding for regulatory context.
README
Clinical Intelligence MCP Server - MVP 1
What this MVP includes
- ClinicalTrials.gov v2 search
- PubMed search via NCBI E-utilities
- Open Targets target lookup
- openFDA regulatory context
- Optional Vertex AI Google Search grounding
- FastMCP over Streamable HTTP for LibreChat
Local setup
python -m venv .venv
source .venv/bin/activate # Windows: .venv\Scripts\activate
pip install -r requirements.txt
cp .env.example .env
uvicorn app.main:app --reload --host 0.0.0.0 --port 8000
Health checks
curl http://localhost:8000/health
curl http://localhost:8000/health/sources
MCP endpoint
Useful test URLs
curl "http://localhost:8000/health/sources"
Pytest
pytest -q
Vertex AI Google Search grounding
This is optional.
Set:
GOOGLE_CLOUD_PROJECT GOOGLE_CLOUD_LOCATION=global ENABLE_VERTEX_WEB_SEARCH=true
Also ensure your environment has Google Cloud credentials available.
If this is disabled, the rest of the server still works.
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